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ARF GTPases (49) Transcriptional activators (47) HSP70-HSP40 interactome (46) A high-density human mitochondrial proximity network (44) Blencowe lab interactome profiling (41) BET rewiring (40) Nuclear bodies (39) Zika interactome (35) Regulation of interactions of the core Hippo pathway (34) Durocher lab (29) Centrosome-cilia (27) E4orf4 (26) Rho GTPases (25) RNA Bodies (17) Myotubularins in abscission (13) Phosphatases in mitosis (10) HSP90 cochaperone network (4) Cancer interactomes by AP-SWATH (3) Optimization of histone AP-MS (2) Hippo Interactome (1)
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ARF GTPases (49) Transcriptional activators (47) HSP70-HSP40 interactome (46) A high-density human mitochondrial proximity network (44) Blencowe lab interactome profiling (41) BET rewiring (40) Nuclear bodies (39) Zika interactome (35) Regulation of interactions of the core Hippo pathway (34) Durocher lab (29) Centrosome-cilia (27) E4orf4 (26) Rho GTPases (25) RNA Bodies (17) Myotubularins in abscission (13) Phosphatases in mitosis (10) HSP90 cochaperone network (4) Cancer interactomes by AP-SWATH (3) Optimization of histone AP-MS (2) Hippo Interactome (1)
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Data sets / Project home (RNA Bodies) / Explore baits

Proximity based map of proteins involved in mRNA life cycle reveals network of protein complexes in RNA-containing bodies

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Bait	Gene ID	GeneName	GeneAliase	Category	Option
ALG13_AS (5220) ALG13_C (4941) ALG13_nAS (5221)	79868	ALG13	CXorf45\|FLJ23018\|FLJ31785\|GLT28D1\|MDS031\|MGC12423\|YGL047W
ANKRD17_C (4942)	26057	ANKRD17	FLJ22206\|GTAR\|KIAA0697\|NY-BR-16
ATXN2_AS (5222) ATXN2_N (4943) ATXN2_nAS (5223)	6311	ATXN2	ATX2\|FLJ46772\|SCA2\|TNRC13
CAPRIN1_AS (5224) CAPRIN1_N (4944) CAPRIN1_nAS (5225)	4076	CAPRIN1	GPIAP1\|GPIP137\|M11S1\|RNG105\|p137GPI
CDC5L_N (4945)	988	CDC5L	CDC5\|CDC5-LIKE\|CEF1\|KIAA0432\|PCDC5RP\|dJ319D22.1
CELF1_C (4946) CELF1_N (4947)	10658	CELF1	BRUNOL2\|CUG-BP\|CUGBP\|CUGBP1\|EDEN-BP\|NAB50\|NAPOR\|hNab50
CEP85_N (4948)	64793	CEP85	CCDC21\|DKFZp434L0117\|DKFZp434P232\|FLJ13976\|FLJ22000
CNOT1_N (4950)	23019	CNOT1	CDC39\|DKFZp686E0722\|DKFZp686O168\|FLJ36492\|FLJ90644\|KIAA1007\|NOT1\|NOT1H
CNOT2_C (4951)	4848	CNOT2	CDC36\|FLJ26456\|NOT2\|NOT2H
CNOT6L_C (4952)	246175	CNOT6L	CCR4b
CNOT7_C (4953)	29883	CNOT7	CAF1\|hCAF-1
CNOT9_C (5039) CNOT9_N (5040)	9125	RQCD1	CNOT9\|CT129\|RCD1\|RCD1+
CPEB4_AS (5226) CPEB4_N (4954) CPEB4_nAS (5227)	80315	CPEB4	KIAA1673
CPSF1_N (4955)	29894	CPSF1	CPSF160\|HSU37012\|P/cl.18
CSDE1_N (4956)	7812	CSDE1	D1S155E\|DKFZp779B0247\|DKFZp779J1455\|FLJ26882\|RP5-1000E10.3\|UNR
CTIF_N (4957)	9811	CTIF	Gm672\|KIAA0427
DAZL_AS (5240) DAZL_N (4958) DAZL_nAS (5241)	1618	DAZL	DAZH\|DAZL1\|DAZLA\|MGC26406\|SPGYLA
DCP1A_N (4959)	55802	DCP1A	FLJ21691\|HSA275986\|Nbla00360\|SMAD4IP1\|SMIF
DDX19B_C (4960)	11269	DDX19B	DBP5\|DDX19\|RNAh
DDX1_AS (5228) DDX1_C (4961) DDX1_nAS (5229)	1653	DDX1	DBP-RB\|UKVH5d
DDX20_N (4962)	11218	DDX20	DKFZp434H052\|DP103\|GEMIN3
DDX3X_AS (5230) DDX3X_N (4963) DDX3X_nAS (5231)	1654	DDX3X	DBX\|DDX14\|DDX3\|HLP2
DDX6_C (4964)	1656	DDX6	FLJ36338\|HLR2\|P54\|RCK
EDC3_C (4966)	80153	EDC3	FLJ21128\|FLJ31777\|LSM16\|YJDC\|YJEFN2
EIF2C2_AS (5232) EIF2C2_N (4967) EIF2C2_nAS (5233)	27161	EIF2C2	AGO2\|MGC3183\|Q10
EIF4A1_N (4968)	1973	EIF4A1	DDX2A\|EIF-4A\|EIF4A\|eIF-4A-I\|eIF4A-I
EIF4A2_C (4969)	1974	EIF4A2	BM-010\|DDX2B\|EIF4A\|EIF4F\|eIF-4A-II\|eIF4A-II
EIF4A3_C (4970)	9775	EIF4A3	DDX48\|DKFZp686O16189\|KIAA0111\|MGC10862\|NMP265\|NUK34\|eIF4AIII
EIF4ENIF1_C (4971)	56478	EIF4ENIF1	4E-T\|Clast4\|FLJ21601\|FLJ26551
ELAVL1_N (4972)	1994	ELAVL1	ELAV1\|HUR\|Hua\|MelG
ETF1_N (4973)	2107	ETF1	D5S1995\|ERF\|ERF1\|MGC111066\|RF1\|SUP45L1\|TB3-1
EXOSC10_N (4974)	5394	EXOSC10	PM-Scl\|PM/Scl-100\|PMSCL\|PMSCL2\|RRP6\|Rrp6p\|p2\|p3\|p4
FAM120A_AS (5242) FAM120A_C (4975) FAM120A_nAS (5243)	23196	FAM120A	C9orf10\|DNAPTP1\|DNAPTP5\|MGC111527\|MGC133257\|OSSA
FAM120C_C (4976) FAM120C_N (4977)	54954	FAM120C	CXorf17\|FLJ20506\|FLJ43676\|ORF34
FAM195A_AS (5234) FAM195A_nAS (5235) MCRIP2_C (4978)	84331	FAM195A	C16orf14\|MGC104301\|MGC15416\|c349E10.1
FMR1_C (4979) FMR1_N (4980)	2332	FMR1	FMRP\|FRAXA\|MGC87458\|POF\|POF1
FUBP3_AS (5236) FUBP3_N (4981) FUBP3_nAS (5237)	8939	FUBP3	FBP3\|FLJ25229
FXR1_C (4982) FXR1_N (4983)	8087	FXR1	FXR1P
FXR2_C (4984) FXR2_N (4985)	9513	FXR2	FMR1L2\|FXR2P
G3BP1_AS (5244) G3BP1_N (4986) G3BP1_nAS (5245)	10146	G3BP1	G3BP\|HDH-VIII\|MGC111040
GLE1_C (4987)	2733	GLE1	GLE1L\|LCCS\|LCCS1\|hGLE1
Grsf1_C (4988)	231413	Grsf1	B130010H02\|BB232551\|C80280\|D5Wsu31e
GTPBP1_C (4989)	9567	GTPBP1	GP-1\|GP1\|HSPC018\|MGC20069
HDLBP_C (4990)	3069	HDLBP	FLJ16432\|HBP\|PRO2900\|VGL
Helz_N (4991)	78455	Helz	3110078M01Rik\|9430093I07Rik\|9630002H22Rik\|AI851979\|DRHC\|KIAA0054
IBTK_N (4992)	25998	IBTK	BTKI\|KIAA1417\|MGC142256\|MGC142258\|RP1-93K22.1
IGF2BP1_C (4993)	10642	IGF2BP1	CRD-BP\|CRDBP\|IMP-1\|IMP1\|VICKZ1\|ZBP1
IGF2BP2_C (4994)	10644	IGF2BP2	IMP-2\|IMP2\|VICKZ2\|p62
ILF3_C (4995)	3609	ILF3	CBTF\|DRBF\|DRBP76\|MMP4\|MPHOSPH4\|MPP4\|NF-AT-90\|NF110\|NF110b\|NF90\|NF90a\|NF90b\|NFAR\|NFAR-1\|NFAR2\|TCP110\|
IPO11_C (4996)	51194	IPO11	RanBP11
KIAA0355_C (4997) KIAA0355_N (4998)	9710	KIAA0355	-
KIAA1429_N (5000)	25962	KIAA1429	DKFZp434I116\|DKFZp781B2117\|MGC138493\|MGC141940\|fSAP121
KIF1B_C (5002) KIF1B_N (5001)	23095	KIF1B	CMT2\|CMT2A\|CMT2A1\|FLJ23699\|HMSNII\|KIAA0591\|KIAA1448\|KLP\|MGC134844\|NBLST1
LARP4B_C (5003)	23185	LARP4B	DKFZp686M23113\|KIAA0217\|LARP5
LSM12_C (5004)	124801	LSM12	FLJ30656\|MGC104211\|PNAS-135
LSM14A_N (5005)	26065	LSM14A	C19orf13\|DKFZp434D1335\|FAM61A\|RAP55\|RAP55A
LSM1_C (5006)	27257	LSM1	CASM\|YJL124C
LSM2_N (5007)	57819	LSM2	C6orf28\|G7B\|YBL026W\|snRNP
LSM4_N (5008)	25804	LSM4	GRP\|YER112W
LZTS2_C (5009)	84445	LZTS2	KIAA1813\|LAPSER1
MARF1_N (4999)	9665	KIAA0430	LKAP\|MARF1\|PPP1R34
MEX3B_C (5011)	84206	MEX3B	DKFZp434J0617\|MEX-3B\|MGC117199\|RKHD3\|RNF195
MKRN2_C (5012) MKRN2_N (5013)	23609	MKRN2	RNF62
MOV10_AS (5246) MOV10_C (5014) MOV10_nAS (5247)	4343	MOV10	DKFZp667O1423\|FLJ32791\|KIAA1631\|fSAP113\|gb110
NCBP2_N (5015)	22916	NCBP2	CBC2\|CBP20\|NIP1
NUFIP2_C (5016)	57532	NUFIP2	182-FIP\|82-FIP\|FIP-82\|FLJ10976\|KIAA1321\|MGC117262
NXF1_N (5017)	10482	NXF1	DKFZp667O0311\|MEX67\|TAP
OTUD4_AS (5248) OTUD4_N (5018) OTUD4_nAS (5249)	54726	OTUD4	DKFZp434I0721\|DUBA6\|HIN1\|HSHIN1\|KIAA1046
PABPC1_AS (5238) PABPC1_N (5019) PABPC1_nAS (5239)	26986	PABPC1	PAB1\|PABP\|PABP1\|PABPC2\|PABPL1
PAIP1_N (5020)	10605	PAIP1	MGC12360
PAIP2_C (5021)	51247	PAIP2	MGC72018\|PAIP2A
PARN_C (5022)	5073	PARN	DAN
PATL1_C (5023)	219988	PATL1	FLJ36874\|MGC125671\|MGC125672\|Pat1b\|hPat1b
PDCD4_N (5024)	27250	PDCD4	H731\|MGC33046\|MGC33047
PPP4C (5216)	5531	PPP4C	PP4\|PP4C\|PPH3\|PPP4\|PPX
PPP4R2 (5215) PPP4R2 (5217)	151987	PPP4R2	MGC131930\|PP4R2
PPP4R3A (5214) PPP4R3A (5218)	55671	SMEK1	FLFL1\|KIAA2010\|PP4R3A\|smk-1\|smk1
PPP4R3B (5219)	57223	SMEK2	FLFL2\|FLJ31474\|KIAA1387\|PP4R3B\|PSY2\|smk1
PRPF19_N (5025)	27339	PRPF19	NMP200\|PRP19\|PSO4\|SNEV\|UBOX4\|hPSO4
PRRC2A_C (5026)	7916	PRRC2A	BAT2\|D6S51\|D6S51E\|DKFZp686D09175\|G2
PRRC2B_C (5027)	84726	PRRC2B	BAT2L\|BAT2L1\|DKFZp781F05101\|DKFZp781K12107\|KIAA0515\|LQFBS-1\|MGC10526
PUM1_C (5029)	9698	PUM1	HSPUM\|KIAA0099\|PUMH\|PUMH1\|PUML1
R3HDM2_N (5030)	22864	R3HDM2	KIAA1002\|PR01365
RBM47_C (5032)	54502	RBM47	DKFZp686F02235\|FLJ20273\|FLJ21344\|FLJ21643\|NET18
RBMS1_C (5033)	5937	RBMS1	C2orf12\|DKFZp564H0764\|HCC-4\|MGC15146\|MGC3331\|MGC70597\|MGC97258\|MGC97270\|MGC97282\|MGC99543\|MSSP\|MSSP-
Rc3h1_C (5034)	381305	Rc3h1	5730557L09Rik\|Gm551\|N28103\|mKIAA2025
RC3H2_C (5035)	54542	RC3H2	FLJ20301\|FLJ20713\|MGC52176\|MNAB\|RNF164
RNF214_C (5036)	257160	RNF214	DKFZp547C195
RNF219_C (5037)	79596	RNF219	C13orf7\|DKFZp686A01276\|DKFZp686N15250\|DKFZp686O03173\|FLJ13449\|FLJ25774
RNGTT_N (5038)	8732	RNGTT	CAP1A\|DKFZp686J2031\|HCE\|HCE1\|hCAP
SAMD4B_C (5041)	55095	SAMD4B	FLJ10211\|MGC99832\|SMGB\|hSmaug2
SDCCAG3_C (5042) SDCCAG3_N (5043)	10807	SDCCAG3	NY-CO-3
SMAP2_C (5045)	64744	SMAP2	RP1-228H13.3\|SMAP1L
SMG6_C (5046)	23293	SMG6	C17orf31\|EST1A\|KIAA0732\|SMG-6\|hSMG5/7a
SMG7_C (5047) SMG7_N (5048)	9887	SMG7	C1orf16\|EST1C\|FLJ23717\|KIAA0250\|SGA56M
ST7_N (5049)	7982	ST7	DKFZp762O2113\|ETS7q\|FAM4A\|FAM4A1\|HELG\|RAY1\|SEN4\|TSG7
STAU1_C (5050) STAU1_N (5051)	6780	STAU1	FLJ25010\|STAU
STRAP_C (5052)	11171	STRAP	MAWD\|PT-WD\|UNRIP
SUPT5H_C (5053)	6829	SUPT5H	FLJ34157\|SPT5\|SPT5H\|Tat-CT1
SYMPK_N (5054)	8189	SYMPK	FLJ27092\|SPK\|SYM
SYNCRIP_C (5055)	10492	SYNCRIP	FLJ31626\|GRY-RBP\|GRYRBP\|HNRPQ1\|NSAP1\|PP68\|hnRNP-Q
TBK1_C (5056)	29110	TBK1	FLJ11330\|NAK\|T2K
TDRD3_C (5057) TDRD3_N (5058)	81550	TDRD3	FLJ21007
THOC1_N (5060)	9984	THOC1	HPR1\|P84\|P84N5
TIA1_N (5061)	7072	TIA1	TIA-1
TNRC6A_C (5062) TNRC6A_N (5063)	27327	TNRC6A	CAGH26\|DKFZp666E117\|FLJ22043\|GW1\|GW182\|KIAA1460\|MGC75384\|TNRC6
TNRC6B_C (5064) TNRC6B_N (5065)	23112	TNRC6B	KIAA1093
TNRC6C_N (5066)	57690	TNRC6C	FLJ20015\|KIAA1582
TOP3B_C (5067)	8940	TOP3B	FLJ39376
TRIM25_N (5068)	7706	TRIM25	EFP\|RNF147\|Z147\|ZNF147
TRIM56_N (5069)	81844	TRIM56	DKFZp667O116\|FLJ35608\|RNF109
UBAP2L_C (5070)	9898	UBAP2L	FLJ42300\|KIAA0144\|NICE-4
UNK_C (5071) UNK_N (5072)	85451	UNK	KIAA1753\|ZC3H5\|ZC3HDC5
USP10_C (5073)	9100	USP10	KIAA0190\|MGC2621\|UBPO
XRN1_C (5074)	54464	XRN1	DKFZp434P0721\|DKFZp686B22225\|DKFZp686F19113\|FLJ41903\|SEP1
XRN2_N (5075)	22803	XRN2	-
YTHDF1_C (5076)	54915	YTHDF1	C20orf21\|FLJ20391
YTHDF2_C (5077) YTHDF2_N (5078)	51441	YTHDF2	HGRG8\|NY-REN-2
YTHDF3_C (5079) YTHDF3_N (5080)	253943	YTHDF3	FLJ31657
ZC3H7A_C (5081) ZC3H7A_N (5082)	29066	ZC3H7A	FLJ10027\|FLJ20318\|ZC3H7\|ZC3HDC7
ZC3HAV1_C (5083) ZC3HAV1_N (5084)	56829	ZC3HAV1	DKFZp686F2052\|DKFZp686H1869\|DKFZp686O19171\|FLB6421\|FLJ13288\|MGC48898\|PARP13\|ZAP\|ZC3H2\|ZC3HDC2
ZCCHC11_C (5085)	23318	ZCCHC11	DKFZp779C1943\|FLJ42878\|PAPD3\|TUT4
ZFP36_C (5087)	7538	ZFP36	G0S24\|GOS24\|NUP475\|RNF162A\|TIS11\|TTP